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JOREK Wiki
Information for New JOREK Users
Compiling and Running
Getting Started
Tutorials
Compile
Hard-Coded Parameters
Preprocessor Flags
Run
Systems
Leonardo-CPU
Pitagora-CPU
Pitagora-GPU
IPP Garching
ITER Cluster
EUROfusion Gateway
TGCC-CEA
MacOS
List of Input Parameters
Diagnostics and Scripts
JOREK-IMAS
Code Development
Development Workflow
Regression Tests
Physics Models
Notation Conventions
Normalization
Vector Identities
Coordinate Systems
Base Fluid Models
Tokamak Reduced MHD
Tokamak Full MHD
Stellarator Reduced MHD
Kinetic Particle Module
Model Extensions
Free Boundary Extension (STARWALL, CARIDDI)
Impurities
Impurities — Fluid Model
Impurities — Marker Model
Impurities — Kinetic Model
ADAS Atomic Data
Neutrals
Neutrals — Fluid Model
Neutrals — Kinetic Model
Runaway Electrons
REs — Fluid Model
REs — Kinetic Model
Numerics and Tools
Spatial Discretization
Grids
Time Integration
Element Matrix FFT
Solver and Preconditioner
Random-Number Generators
HDF5 Tools
Howto
First Steps
Get Started with JOREK
Get Started with JOREK-STARWALL
Get Started with JOREK-CARIDDI
Get Started with JOREK Diagnostics
Grid and Equilibrium
Set Up a JOREK Simulation Grid
Convert EFIT Data with eqdsk2jorek
Create an X-Point Plasma from a Limiter Plasma
Physics Options
Run with Diamagnetic Drift
Run with Neoclassical Effects
Include Diamagnetic Drift in Viscosity
Run with RMPs
Run with Ohmic Heating
Run with Sheath Heat-Flux BC
Get D_perp and ZK_perp for Stationary Profiles
Check Energy Conservation
Set Up Spitzer Resistivity
Activate the Inward Pinch Term
Computing Parallel Electric Field in JOREK
Helicity Conservation
Use the Controller Module
Numerics and Stabilization
Run with Taylor-Galerkin Stabilization
Correct Negative Densities / Temperatures
Run with Mode Groups in Preconditioner
Choose Boundary Conditions
Use Shock Capturing Features
Variable MultiScale (VMS) Stabilization
Run with Non-Linear Time-Stepping (Newton)
Compress the Response Matrices
Impurities, Neutrals and Fuelling
Run an MGI Simulation
Run an SPI Simulation
Run with Kinetic Neutrals and Impurities
Run Particle Simulations with Neutral Collisions
Kinetic Particles
Use Phase Space Projections
Assess Particle Wall Loads with Particle Tracker
Generate Poincaré Plots with Particle Tracker
Runaway Electron Physics in Particle Tracker
Compile and Run the Particle Fast Camera
Post-processing
Calculate B Outside and Inside the JOREK Grid
Calculate Total Wall Forces
Assess Fluid Loads on 3D Walls
Plot Equation Terms in VTK
Show Time in Paraview Plots
Reconstruct Namelist Input Parameter Changes
Stellarator
Run Stellarator Simulations
Run Stellarator Model with Divertor Region
Machines
ITER
JET
ASDEX Upgrade
Contributing to the Docs
Publication Rules
JOREK Logo
FAQ
Code License
JOREK Website
Physics Models
Base Fluid Models
This page is a stub — content to be added.
Table of contents
Tokamak Reduced MHD
Tokamak Full MHD
Stellarator Reduced MHD